The objective os this text is to describe the political-pedagogical project of the Professional Masters Course implanted in the Graduate Program of the Institute of Collective Health (ICH), in 2000, and relate the experience accumulated with the offering of 5 editions of the course, implemented in partnership with state and national institutions. The paper presents the general objectives, curricular structurre and the dynamics of course realization and describes, in a general manner, the ezperience undertaken and the results achieved with the implemention of the courses, two already completed and three in progress. These courses have two distinct areas of concentration: a) Teaching in Family Health, in the 2001-2002 period, in partnership with the the State University of Santa Cruz, in Ilhéus, Bahia; b) Governance of Health Systems (2001-2002 and 2004-2005), and another in partnership with State Secretariat of Education of Goiás (2003- 2004). In the second semester of 2005 another edition of the course was initiated, with an area of concentration in Sanitary Vigilance, offered in colaboration with the Anvisa.